learning program
publications
 
 
 
 

Publications by fellows

Journal articles

  1. I. Stoyanova, W.L.C. Rutten, J. le Feber : “ Orexin-A and Orexin-B During the Postnatal Development of the Rat Brain” , Cell Mol Neurobiology, 2009.
  2. I. Stoyanova, R. W. F. Wiertz, W. L. C. Rutten : “ Time-dependent changes in ghrelin-immunoreactivity in dissociated neuronal cultures of the newborn rat neocortex” , Regulatory peptides, 2009, (in press).
  3. A. Sharott, C.K. Moll., G. Engler, M. Denker, S. Grün , A. K. Engel: “Different subtypes of striatal neurons are selectively modulated by cortical oscillations”, Journal of Neuroscience , 29(14):4571-85, April 8, 2009.
  4. A. Sharott, P. Grosse, A. Kühn, F. Salih, A. K. Engel, A. Kupsch, G. H. Schneider, J. K. Krauss, and P. I. Brown, "Is the synchronization between pallidal and muscle activity in primary dystonia due to peripheral afferance or a motor drive?", Brain , vol. 131, pp. 473-84, 2008.
  5. F. Salih , A. Sharott, R. Khatami, T. Trottenberg, G. Schneider, A. Kupsch, P. Brown, P. Grosse: “Functional connectivity between motor cortex and globus pallidus in human non-REM sleep”, 587(Pt5):1071-86, March 2009, Journal of Physiology.
  6. N. Mallet, A. Pogosyan, A. Sharott, J. Csicsvari, J. P. Bolam, P. Brown, P. J. Magill : “ Disrupted dopamine transmission and the emergence of exaggerated beta oscillations in subthalamic nucleus and cerebral cortex ”, Journal of Neuroscience, 28: 4795-4806, 2008.
  7. K. Imfeld, S. Neukom, A. Maccione, Y. Bornat, S. Martinoia, P.-A. Farine, M. Koudelka-Hep, and L. Berdondini, "Large-scale, high-resolution data acquisition system for extracellular recording of electrophysiological activity" IEEE Transactions of Biomedical Engineering , pp. In press, 2008.

Book chapters

  1. T. Gritsun, J. Stegenga, J. Le Feber and W.L.C.Rutten.: “ Cultured Neuronal Networks: explaining burst profiles using models with realistic parameters and plastic synapses ”,  Proceedings of the 6th international meeting on substrate-integrated Micro Electrode Arrays, July 8-11, 2008, Reutlingen, Germany, pp. 26-28, BIOPRO Baden-Wuerttemberg GmbH, Stuttgart, Germany.
  2. I. Stoyanova, R.W.F. Wiertz, W.L.C. Rutten: “ Ghrelin expression in dissociated cultures of the rat neocortex” , Proceedings of the 4th International SaD1.19 IEEE EMBS Conference on Neural Engineering, pp 159-162, April 29 - May 2, 2009, Antalya, Turkey.
  3. T. Gritsun, J. Stegenga, J. le Feber W.L.C. Rutten : “ Network bursts in cortical neuronal cultures: 'Noise- versus pacemaker'- driven neural network simulations ”, Proceedings of the 4th International SaD1.19 IEEE EMBS Conference on Neural Engineering, pp 626-628, April 29 - May 2, 2009, Antalya, Turkey.

Conference papers

  1. A. Martiniuc, W. Stürzl, A. Knoll, G. Zeck : “Different Processing of Directional Information from Neural Output of Rabbit Retina Activity ”, Proceedings Book, 6th International Meeting on Substrate-Integrated Micro Electrode Arrays, July 8-11, 2008, Reutlingen , Germany.
  2. P. Massobrio, P. L. Baljon, A. Maccione, M. Chiappalone, S. Martinoia: “Different Activity modulation elicited by electrical stimulation in networks of dissociated cortical neurons”, 29th Annual International Conference of the IEEE EMBS , 2007, Lyon , France.
  3. M. Casadio, V. Novakovic, P. Morasso, V. Sanguineti : “Modeling the Dynamics of the Recovery Process in Robot Therapy ”, Virtual Rehabilitation, Haifa , Israel .
  4. V. Novakovic, M. Casadio, V. Sanguineti, P. Morasso: "Adaption of Reaching Movements to Assistive Forces", IROS Workshop on Mobiligence: Adaptive Motor Behaviors through Dynamic InteractionsAmong the Body, Brain and Environment , September 26, 2008, Nice, France .
  5. V. Tikhanoff, A. Cangelosi, G. Metta : " Language Understanding in Humanoid Robots: Simulation Experiments with iCub Platform", KIMAS'09 Knowledge Intensive Multi-agent systems, St. Louis MO October 2009.
  6. B. Belhadj, J. Toma : "Un système mixte de traitement de l'information neuronale destiné à la simulation des réseaux de neurones réalistes", Journées Nationales du Réseau Doctoral de Microélectronique, May 14-16 2008, Bordeaux , France .
  7. B. Belhadj, J. Tomas, O. Malot, G. N'kaoua, Y. Bornat, S. Renaud: "FPGA-based Architecture for Real-time Synaptic Plasticity Computation", International Conference on Electronics, Circuits and Systems , ICECS'08, Aug 31 - Sept 3, 2008 , Malta.
  8. T. Gritsun, M. Litza, A. Hiller, A. Moser, and U. G. Hofmann : " Semichronic, Collocated Deep Brain Stimulation and Multisite Recording in Rats ”, International Conference on Microtechnologies in Medicine and Biology, 2006.
  9. T. Gritsun, J. Stegenga, J.le Feber and W.L.C. Rutten: “Networkbursts in cortical neuronal cultures: 'Noise- versus pacemaker'- driven neural network simulation”, 4th International IEEE EMBS Conference , 29 April 2009, Antalya , Turkey.
  10. T. Gritsun, S. Vogt, G. Engler, C. K. E. Moll, A. K. Engel, S. Kondra , L. Ramrath, U. G. Hofinann :" A Simple Microelectrode Bundle for Deep Brain Recordings ", 3rd International IEEE/EMBS Conference on Neural Engineering, May 2-5, 2007, Hawai.
  11. T. Gritsun, J. Stegenga, J.le Feber and W.L.C. Rutten : “Explaining burst profiles using models with realistic parameters and plastic synapses”, Proceedings of the 6 th international meeting on substrate-integrated micro electrode arrays, July 8-11, 2008, Reutlingen , Germany .
  12. I. Stoyanova, R. F. Wiertz, W.L.C. Rutten : “Ghrelin expression in dissociated cultures of the rat neocortex”, Proceedings of the 4th International, IEEE EMBS Conference on Neural Engineering , April 29 - May 2, 2009, Antalya, Turkey.
  13. I. Stoyanova, R. W. F. Wiertz, W L. C. Rutten “Orexins and orexin-receptors expression in the neocortex of the rat: developmental studyexpression”, PAPER contribution BMTI/iBME Symposium ‘Highlights in BioMedical Technology' , November 2008, Universiteit Twente , Netherlands.
  14. G. Bontorin, A. Garenne J. Tomas, C. Lopez, F. Morin, S. Renaud: "A real-time setup for multisite stimulation on living neural networks", IEEE North East Workshop on Circuits and Systems 2009 (NEWCAS 09), pp. 396-399, 28 June-1st July, 2009, Toulouse, France.
  15. G. Bontorin, C. Lopez, Y. Bornat, N. Lewis, S. Renaud, A. Garenne, M. Chanaud, G. Le Masson: "A Real-time Setup for Multisite Signal Recording and Processing in Living Neural Networks", InternationaI Symposium on Circuits And Systems 2008 , May 18-21 2008, Seattle, USA.
  16. G. Bontorin, J. Tomas, S. Renaud : " Low Noise and Low Cost Neural Amplifiers ", 14th IEEE International Conference on Electronics, Circuits and Systems ICECS, December 11-14 2007, Marrakech, Marocco.
  17. G. Bontorin, S. Renaud, A. Garenne, L. Alvado, G. LeMasson, J. Tomas : " A Real-Time Closed-Loop Setup for Hybrid Neural Networks ", 29th Annual Int. Conference of the IEEE EMBS, August 23-26, 2007, Lyon, France.
  18. Levi, N. Lewis, Y. Bornat, A. Destexhe, J. Tomas : " An IP-based library for the design of analog Hodgkin Huxley neurons ", Systems, Signal and Devices Conference SSD, March 19-22, 2007, Hammamet , Tunisia .
  19. S. Renaud, J. Tomas, Y. Bornat, A. Daouzli, S. Saïgh : " Neuromimetic ICs with analog cores: an alternative for simulating spiking neural networks ", ISCAS07, 2007, New Orleans , USA .
  20. F. Postma, R. A. Koene, J. van Pelt, Arjen van Ooyen : “ NETMORPH: A framework for the stochastic generation of large scale neuronal networks with realistic morphology ”, 1st INCF Congress of Neuroinformatics (Abstract), September 7-9, 2008, Stockholm , Sweden .
  21. R. A. Koene, F. Postma, J. van Pelt , A. van Ooyen : “ Stochastic generation of large scale neuronal networks with realistic morphology ” Dutch Endo-Neuro-Psycho Meeting, 7th ENP (Lecture), June 4-6, 2008, Doorwerth, The Netherlands.
  22. R. A. Koene, J. van Pelt., A. van Ooyen : “ NETMORPH DEMO ”, INCF booth FENS, 6th FENS Forum of European Neuroscience, 2008, Geneva , Switzerland .
  23. R. A. Koene, J. van Pelt, A. van Ooyen : “ Large scale high resolution network generation: Producing known validation sets for serial reconstruction methods that use histological images of neural tissue ” Presented at the International Conference on Complex Systems (Oral presentation), 2007, Boston, MA.
  24. R. A. Koene, J. van Pelt, A. van Ooyen : “ Stochastic generation and analysis of large scale neuronal networks with realistic morphology using NETMORPH ”, 6th FENS Forum of European Neuroscience (Abstract), Geneva , Switzerland .
  25. R. A. Koene, J. van Pelt, A. Van Ooyen : “ Stochastic generation of large scale neuronal networks with realistic morphology ”, Dutch Endo-Neuro-Psycho Meeting, 7th ENP (Abstract), June 4-6, 2008, Doorwerth, the Netherlands .
  26. O. J. Avella Gonzalez, R van Elburg, H. D. Mansvelder, J. van Pelt and A. van Ooyen : “ Understanding Oscillatory Activity in Cortical Microcircuits ”, Dutch Endo-Neuro-Psycho Meeting, 7th ENP Meeting (Abstract), June 4-6, 2008, Doorwerth, the Netherlands.

Posters

  1. V. Novakovic : “ Learning and Assistance Modeling for Patient Rehabilitation ” ESOF, 2008, Barcelona , Spain.
  2. V. Novakovic, V. Sanguineti, P. Morasso: “ EEG Correlates of Assistive Forces in Arm Reaching Movements ”, NCM, 2009, Hawaii .
  3. M. Casadio, V. Novakovic, P. Morasso, V. Sanguineti : “ Modeling the Dynamics of Motor Recovery in Robot Therapy ” NCM, 2009, Hawaii .
  4. V. Novakovic, V. Sanguineti, P. Morasso : “ Effects of the Assistive Force on Motor Imagery During Reaching Movements ” Neuroscience, 2009, Chicago , US .
  5. A. Gulberti , C. K. E. Moll, A. Sharott, W. Hamel, A. Muenchau, C. Buhmann, U. Hidding, S. Zittel, C. Gerloff, M. Westphal, D. Mueller, and A. K. Engel : " Pallidal neuronal activity in myoclonus- dystonia syndrome ", International Basal Ganglia Society, IBAGS 9th Triennial Meeting (Poster), September 2-6, 2007 , Egmond aan Zee, the Netherlands.
  6. A. Sharott, C. K. E. Moll, G. Engler, M. Denker, S. Grün, and A. K. Engel : " Dynamic modulation of spontaneous firing rate and pattern of striatal neuron subtypes by cortical oscillations in the halothane anaesthetized rat ", International Basal Ganglia Society, IBAGS 9th Triennial Meeting (Poster), September 2-6, 2007, Egmond aan Zee, the Netherlands.
  7. B. M. Grieb, C. K. E. Moll, G. Engler, A. Sharott, W. Hamel, and A. K. Engel : " Changes of locomotor activity following microelectrode recording-guided 6-OHDA lesions of the substantia nigra in the rat ”, International Basal Ganglia Society, IBAGS 9th Triennial Meeting, (poster), September 2-6, 2007, Egmond aan Zee, the Netherlands.
  8. C. Von Nicolai, G. Engler, C. K. E. Moll, A. Sharott, and A. K. Engel : " Different levels of mot or activity are reflected in changes of oscillatory neuronal patterns along the cortico-striatal axis of awake rats ", International Basal Ganglia Society, 9th Triennial Meeting (Poster), September 2-6, 2007, Egmond aan Zee, the Netherlands.
  9. C. K. E. Moll, A. Sharott, W. Hamel, J. Sarnthein, A. Muenchau, C. Buhmann, U. Hidding, S. Zittel, C. Gerloff, M. Westphal, D. Mueller, and A. K. Engel : " Human striatal neuronal activity in different movement disorders ", International Basal Ganglia Society, IBAGS 9th Triennial Meeting (Poster), September 2-6, 2007, Egmond aan Zee, the Netherlands.
  10. D. H. J. Snijders, J.F. Hipp, A.K. Engel: “ Transient Oscillations in Ongoing Activity ”, 8 th Goettingen Meeting of the German Neuroscience Society, 2009, Goettingen , Germany
  11. O. J. Avella Gonzalez, R. A. J. van Elburg, J. van Pelt, A. van Ooyen : “ Oscillations and phase locking in cortical microcircuits - a modeling study ”, Dutch Endo-Neuro-Psycho Meeting, 7th ENP Meeting (Poster), June 4-6, 2008, Doorwerth, The Netherlands.
  12. F. Postma, P. van Hees, B. Tijms, S. de Ridder, R. Koene, J. van Pelt and A. van Ooyen: “ Modeling neuronal morphology and synaptic connectivity using NETMORPH ”, 1 st Neuroinformatics Congress (Flash presentation and Poster), September 7-9, 2008, Stockholm, Sweden.
  13. R. A. Koene, J. van Pelt, A. van Ooyen : “ Stochastic generation and analysis of large scale neuronal networks with realistic morphology using NETMORPH” , NETMORPH at FENS (Poster and Demonstration), 12-16 July 2008, Geneva , Switzerland .
  14. R. A. Koene, J. van Pelt, A. van Ooyen : “ Stochastic neuronal morphogenesis and network development with NETMORPH ”, NWO Computational Life Sciences Meeting (Poster), 2007, Utrecht, Netherlands.

Other Neurovers-It Publications

Journal articles

  1. L. Cozzi, P. D'Angelo, and V. Sanguineti, "Encoding of Time-varying Stimuli in Populations of Cultured Neurons", Biological Cybernetics , vol. 94, pp. 335-49, 2006.
  2. J. le Feber, J. van Pelt, W. L. C. Rutten : “ Latency-related development of functional connections in cultured cortical networks ”, Biophysical Journal, Vol. 96, pp. 3434-3450, 2009.
  3. J. le Feber, W. L. C. Rutten, P. S. Stegenga, G. J. A. Wolters, Ramakers, and J. van Pelt, "Conditional firing probabilities in cultured neuronal networks: a stable underlying structure in widely varying spontaneous activity patterns", Journal of Neural Engineering , vol. 4, pp. 54-67, 2007.
  4. J. Stegenga, J. Le Feber, E. Marani, W.L.C.Rutten : “ Analysis of cultured neuronal networks using intra-burst firing characteristics ”, IEEE Transactions on Biomedical Engineering, Vol. 55, no. 4, 1382-1391, 2008.
  5. J. Stegenga, J. le Feber, E. Marani. W. L. C. Rutten : “ The effect of learning on bursting ”, IEEE Transactions on BioMedical Engineering, Vol. 56, pp. 220-1229, 2009.
  6. Vajda, J. v. Pelt, P. Wolters, M. Chiappalone, S. Martinoia, E. v. Someren, and Arjen van Ooyen “”. , "Low-frequency stimulation induces stable transitions in stereotypical activity in cortical networks", Biophysical Journal , 2008.
  7. W. L. C. Rutten, T. G. Ruardij, E Marani , B. H. Roelofsen : “ Cultured neural networks: Optimisation of patterned network adhesiveness and characterisation of their neural activity”, Applied Bionics and Biomechanics, Vol. 3, no. 1, 1-7, 2006.

Book chapters

  1. J. van Pelt and H. B. M. Uylings, "Modeling neuronal growth and shape", in Modeling Biology - Structures, Behaviors, Evolution , M. Laubichler and G. B. Müller, Eds. Cambridge, MA: MIT Press, 2007, pp. 195-215.
  2. T. G. Ruardij, W. L. C. Rutten, G. van Staveren, B. H. Roelofsen : “ Spontaneous and synchronous firing activity in solitary micro-cultures of cortical neurons on chemically patterned Multi-electrode arrays ”, Nanobioelectronics. Electrons, Biology, and Medicine, Eds. A. Offenhauser and R.Rinaldi, Springer, chaper 10, 261-277, pp. ISBN 978-0-387-09458-8, 2009
  3. W. L. C. Rutten, Ruardij, T.G. , Marani, E. and Roelofsen, B.H., "Neural networks on chemically patterned electrode arrays: towards a cultured probe", in Operative Neuromodulation , D. E. Sakas and B. A. Simpson, Eds. Wien/London: Springer Verlag 2007.

Conference papers

  1. J. le Feber, J. Stegenga, W. L. C Rutten: “ Do external stimuli, applied to train cultured cortical networks, disturb the balance between activity and connectivity? ” , Proceedings of the 30th annual international conference of the IEEE- EMBS, pp 5081-5084, 20-25 August, 2008, Vancouver, Canada.
  2. J. le Feber, J. Stegenga, W. L. C Rutten : “ Learning in Live Neuronal Cultures: a Training Protocol Evaluated ” , Proceedings of the 6th international meeting on substrate-integrated micro electrode arrays, July 8-11, 2008, Reutlingen , Germany , pp. 65-67, BIOPRO Baden-Wuerttemberg GmbH, Stuttgart , Germany .
  3. J. le Feber, J. Stegenga, W. L .C. Rutten : “ Slow electrical stimuli affect connectivity in cultured neuronal networks ” , Proceedings of the 4th International SaD1.19 IEEE EMBS Conference on Neural Engineering, April 29 - May 2, 2009, pp 546-549, Antalya, Turkey.
  4. J. le Feber, J. van Pelt, W. L. C. Rutten: “ Latency dependentdevelopment of related firing patterns in cultured neuronal networks ” , Proceedings 29th International Conference of the IEEE Engineering in Medicine and Biology Society, pp. 3000-3004, ISBN CD-ROM, 2007, Lyon, France.
  5. J. le Feber, W. L. C. Rutten, J. Stegenga, P.Wolters, G.Ramakers, J.vanPelt: “ Cultured cortical networks described by conditional firing probablities ” , Proceedings 5th Int. Meeting on Substrate-Integrated Microelectrodes, pp. 67-70, ISBN 3-938345-02-0, July 4-7, 2006, Reutlingen, Germany.
  6. J. Stegenga, J. le Feber, E. Marani, W. L. C. Rutten : “ Changes in bursting caused by learning ” , Proceedings of the 6 th international meeting on substrate-integrated micro electrode arrays, July 8-11, 2008, Reutlingen, Germany, pp. 87-88, BIOPRO Baden-Wuerttemberg GmbH, Stuttgart, Germany.
  7. J. Stegenga, J. le Feber, W. L. C. Rutten : “ Changes within bursts during learning in dissociated neuronal networks ” Proceedings of the 30th annual international conference of the IEEE- EMBS, pp. 4968-4971, 20-25 August, 2008, Vancouver , Canada .
  8. J. Stegenga, J. le Feber, W. L. C. Rutten, E.Marani: “ Intra-burst firing characteristics as network state parameters ” , Proceedings 5th Int. Meeting on Substrate-Integrated Microelectrodes, pp. 64-66, ISBN 3-938345-02-0, July 4-7, 2006, Reutlingen, Germany.
  9. J. van Pelt, H. B. M. Uylings :" Modeling neuronal growth and shape " in Modeling Biology - Structures, Behaviors, Evolution , 2007.
  10. J. van Pelt, I. Vajda, P. S. Wolters, G. Ramakers, and A. van Ooyen, "Effect of low-frequency stimulation on spontaneous firing in cultured neuronal networks," in ICCN 2007 , 2007.
  11. P. A. Wieringa, R. W. F. Wiertz, J.le Feber, W.L.C. Rutten : “ Neural Growth Into A Microchannel Network: Towards A Regenerative Neural Interface ” , Proceedings of the 4th International SaD1.19 IEEE EMBS Conference on Neural Engineering, April 29 - May 2, 2009, pp 51-55, Antalya, Turkey.
  12. R. W. F. Wiertz, W. L. C Rutten : “ Electrical impedance sensing during the inhibiton of cell-cell adhesion ” Proceedings of the 30th annual international conference of the IEEE-EMBS, pp 2012-2015, 20-25 August, 2008, Vancouver, Canada.
   
   
   
   
   

 

 

 

  ©Neurovers-it Consortium 2007
webdesign paololafarina.com